Publications

| Network Quality of Service and Wireless Ad Hoc Networks | Neural Networks and Machine Learning | Energy-Aware Networks |

| Modeling Gene Regulatory Networks | Search in Random Environments | PhD Dissertations |

Network Quality of Service and Wireless Ad Hoc Networks (BibTeX)

Ricardo Lent and Erol Gelenbe. Evaluating cpn on a large virtual network testbed. In Proceedings of the 27th International Symposium on Computer and Information Sciences Se ries: Lecture Notes in Electrical Engineering, Paris, France, Sep. 2012.
Ricardo Lent. Evaluating a migration-based response to DoS attacks in a distributed auction system. Computers and Security, 2012.
E. Gelenbe. Self-Aware Networks. McGraw-Hill 2011 Yearbook of Science & Technology - Manuscript ID YB11-0175.
G. Sakellari and E. Gelenbe. A Distributed Admission Control Mechanism for Multi-Criteria QoS. In Proceedings of IEEE GLOBECOM 2010 Workshop on Advances in Communications and Networks, pages 1195–1999, Miami, Florida, USA, 6-10 December 2010.
G. Sakellari and E. Gelenbe. Demonstrating Cognitive Packet Network Resilience to Worm Attacks. In Proceedings of the 17th ACM Conference on Computer and Communications Security (CCS 2010), pages 636–638, Chicago, IL, USA, 4-8 October 2010. ACM, New York, NY, USA.
E. Gelenbe, R. Lent, G. Sakellari, A. Sacan, H. Toroslu, and A. Yazici (Eds). Computer and Information Science, Proceedings of the 25th International Symposium on Computer and Information Sciences Series: Lecture Notes in Electrical Engineering, volume 64. 2010.
R. Lent, O. H. Abdelrahman, and G. Gorbil. A low-latency and self-adapting application layer multicast. In Proceedings of the 25th International Symposium on Computer and Information Sciences (ISCIS 2010), Lecture Notes in Electrical Engineering, pages 169–172, London, UK, 22–24 September 2010. Springer-Verlag, Berlin Heidelberg.
G. Sakellari. A Decentralised, Measurement-based Admission Control Mechanism for Self-Aware Networks. In Accepted for publication in the 25th International Symposium on Computer and Information Sciences (ISCIS 2010), Lecture Notes in Electrical Engineering, pages 177–182, London, UK, 22-24 September 2010. Springer-Verlag, Berlin Heidelberg. (PDF, 162759 bytes)
O. H. Abdelrahman and E. Gelenbe. Performance trade-offs in a network coding router. In Proceedings of 19th IEEE International Conference on Computer Communications and Networks (ICCCN'10), Zurich, Switzerland, 2–5 August 2010. (PDF, 341408 bytes)
R. Lent, O. H. Abdelrahman, G. Gorbil, and E. Gelenbe. Fast message dissemination for emergency communications. In Proceedings of PerCom Workshop on Pervasive Networks for Emergency Management (PerNEM'10), pages 370–375, Mannheim, Germany, March 29–April 02 2010. IEEE, NY, USA. (PDF, 609685 bytes)
Erol Gelenbe Edith C.-H. Ngai, Gregory Humber. Information-aware traffic reduction for wireless sensor networks. 20-23 October 2009. (PDF, 469315 bytes)
Gokce Gorbil and Erol Gelenbe. Design of a mobile agent-based adaptive communication middleware for federations of critical infrastructure simulations. In Eric Rome and Robin Bloomfield, editors, Critical Information Infrastructures Security, volume 6027 of Lecture Notes in Computer Science, pages 34–49. Springer Berlin/Heidelberg, 2009. (PDF, 298580 bytes)
O. H. Abdelrahman and E. Gelenbe. Approximate analysis of a round robin scheduling scheme for network coding. In Proceedings of the 6th European Performance Engineering Workshop (EPEW '09), volume 5652 of Lecture Notes in Computer Science, pages 212–217, London, UK, 9-10 July 2009. Springer-Verlag, Berlin Heidelberg. (PDF, 212609 bytes)
L. Hey and E. Gelenbe. Adaptive packet prioritisation for wireless sensor networks. In Proceedings of Next Generation Internet Networks, pages 1–7, Aveiro, Portugal, July 2009. (PDF, 3317394 bytes)
G. Sakellari. The Cognitive Packet Network: A Survey. The Computer Journal: Special Issue on Random Neural Networks, 53(3):268–279, June 2009, doi: 10.1093/comjnl/bxp053.
O. H. Abdelrahman and E. Gelenbe. Queueing performance under network coding. In Proceedings of IEEE Information Theory Workshop (ITW '09), pages 135–139, Volos, Greece, 10-12 June 2009. IEEE, New York, NY, USA. (PDF, 248197 bytes)
G. Sakellari and E. Gelenbe. Adaptive Resilience of the Cognitive Packet Network in the presence of Network Worms. In Proceedings of the NATO Symposium on C3I for Crisis, Emergency and Consequence Management, pages 16:1–16:14, Bucharest, Romania, 11-12 May 2009. NATO Research & Technology Organisation. (PDF, 385117 bytes)
E. Gelenbe and E. Ngai. Adaptive QoS routing for significant events in wireless sensor networks. In Proceedings of the 5th IEEE International Conference on Mobile Ad-Hoc and Sensor Systems (MASS'08), pages 410–415, Atlanta, GA, USA, 29 September - 2 October 2008. IEEE, New York, NY, USA. (PDF, 370571 bytes)
E. Gelenbe and E. Ngai. Adaptive random re-routing for differentiated QoS in sensor networks. In Proceedings of the Visions of Computer Science Conference, pages 343–354, London, UK, 22-24 September 2008. The British Computing Society, Swindon, UK. (PDF, 461626 bytes)
E. Gelenbe and E. Ngai. Adaptive random re-routing in sensor networks. In Proceedings of the Annual Conference of ITA (ACITA '08), pages 348–349, London, UK, 9 September 2008. (PDF, 332676 bytes)
E. Gelenbe and L. Hey. Quality of information: an empirical approach. In Proceedings of the 5th IEEE International Conference on Mobile Ad-Hoc and Sensor Systems (MASS'08), pages 730–735, Atlanta, GA, USA, 29 September - 2 October 2008. IEEE, New York, NY, USA. (PDF, 119994 bytes)
E. Gelenbe and L. Hey. Experimental insights into quality of information. In Proceedings of the Annual Conference of ITA (ACITA '08), pages 298–299, London, UK, 9 September 2008. (PDF, 76280 bytes)
G. Sakellari and E. Gelenbe. A Multiple Criteria, Measurement-Based Admission Control Mechanism for Self-Aware Networks. In Proceedings of the third International Conference on Communications and Networking in China (CHINACOM'08), Best Paper Award, pages 1060–1064, Hangzhou, China, 25-27 August 2008. IEEE, New York, NY, USA. (PDF, 239416 bytes)
E. Gelenbe. Analysis of single and networked auctions. ACM Transactions on Internet Technology, 9(2), May 2009. (PDF, 248017 bytes)
G. Sakellari, L. Hey, and E. Gelenbe. Adaptability and Failure Resilience of the Cognitive Packet Network. Presented at the Demo Session of the INFOCOM2008, 15-17 April 2008. (PDF, 65434 bytes)
E. Gelenbe, G. Sakellari, and M. D' Arienzo. Admission of QoS Aware Users in a Smart Network. ACM Transactions on Autonomous and Adaptive Systems, 3(1):4:1–4:28, March 2008. (PDF, 3314463 bytes)
E. Gelenbe. Dealing with software viruses: A biological paradigm. Information Security Technical Report, 12(4):242–250, 2007, doi:10.1016/j.istr.2007.11.002. (PDF, 299799 bytes)
R. Lent. On the impact of network QoS on automated distributed auctions. In Proceedings of the 2nd International Conference on Bio-Inspired Models of Network, Information, and Computing Systems, Workshop on Technologies for Situated and Autonomic Communications, 2007.
Gülay Öke and Georgios Loukas. A denial of service detector based on maximum likelihood detection and the random neural network. Computer Journal, 50(6):717–727, November 2007. (PDF, 407905 bytes)
G. Sakellari, E. Gelenbe, and M. D’Arienzo. Admission of Packet Flows in a Self-Aware Network. In Proceedings of the 4th IEEE International Conference on Mobile Ad-Hoc and Sensor Systems (MASS'07), pages 1–6, Pisa, Italy, 8-11 October 2007. IEEE Computer Society, Washington, DC, USA. (PDF, 156879 bytes)
E. Gelenbe and M. Gellman. Oscillations in a bio-inspired routing algorithm. In Proceeding of the 4th IEEE International Conference on Mobile Adhoc and Sensor Systems (MASS '07), pages 1–7, Pisa, Italy, 8-11 October 2007. IEEE Computer Society, Washington, DC, USA. (PDF, 133447 bytes)
G. Loukas and G. Oke. A biologically inspired denial of service detector using the random neural network. In Proceeding of the 4th IEEE International Conference on Mobile Adhoc and Sensor Systems (MASS '07), pages 1–7, Pisa, Italy, 8-11 October 2007. IEEE Computer Society, Washington, DC, USA. (PDF, 139043 bytes)
G. Oke, G. Loukas, and E. Gelenbe. Detecting denial of service attacks with bayesian classifiers and the random neural network. In Proceedings of Fuzz-IEEE 2007, pages 1964–1969, London, UK, July 2007. IEEE, New York, NY, USA. (PDF, 277526 bytes)
G. Loukas and G. Oke. Likelihood ratios and recurrent random neural networks in detection of denial of service attacks. In Proceedings of International Symposium of Computer and Telecommunication Systems (SPECTS '07), San Diego, CA, USA, 16-18 July 2007. (PDF, 254619 bytes)
E. Gelenbe, A. Filippoupolitis, and I. Eid. Energy and time trade-offs in duplicate packet transmission. In Proceedings of International Symposium of Computer and Telecommunication Systems (SPECTS '07), San Diego, CA, USA, 16-18 July 2007. (PDF, 192503 bytes)
E. Gelenbe, G. Sakellari, and M. D' Arienzo. Controlling Access to Preserve QoS in a Self-Aware Network. In Proceedings of the First IEEE International Conference on Self-Adaptive and Self-Organizing Systems (SASO), pages 205–213, Boston, MA, USA, 9-11 July 2007. IEEE Computer Society, Washington, DC, USA. (PDF, 180818 bytes)
E. Gelenbe. A diffusion model for packet travel time in a random multi-hop medium. ACM Transactions on Sensor Networks, 3(2):1–19, June 2007. (PDF, 356194 bytes)
Laurence A. Hey. Reduced complexity algorithms for cognitive packet network routers. Computer Communications, 31(16):3822 – 3830, 2008.
P. Liu and E. Gelenbe. Recursive routing in the cognitive packet network. In Proceedings of 3rd International Conference on Testbeds and Research Infrastructures for the Development of Networks and Communities (TridentCom'07), pages 1–6, 21-23 May 2007. (PDF, 332462 bytes)
Erol Gelenbe and George Loukas. A self-aware approach to denial of service defence. Computer Networks, 51(5):1299–1314, April 2007. (PDF, 693749 bytes)
Simon Dobson, Spyros Denazis, Antonio Fernández, Dominique Gaïti, Erol Gelenbe, Fabio Massacci, Paddy Nixon, Fabrice Saffre, Nikita Schmidt, and Franco Zambonelli. A survey of autonomic communications. ACM Trans. Auton. Adapt. Syst., 1(2):223–259, 2006. (PDF, 556270 bytes)
E. Gelenbe, P. Liu, and J. Laine. Genetic Algorithms for Route Discovery. IEEE Transactions on Systems, Man and Cybernetics B, 36(6):1247–1254, December 2006. (PDF, 245824 bytes)
G. Sakellari, M. D' Arienzo, and E. Gelenbe. Admission Control in Self Aware Networks. In Proceedings of the 49th annual IEEE Global Telecommunications Conference (GLOBECOM 2006), pages 1–5, San Francisco, CA, USA, 27 November - 1 December 2006. IEEE, New York, NY, USA. (PDF, 172496 bytes)
V. Guffens and G. Bastin. Singular perturbation analysis of an additive increase multiplicative decrease control algorithm under time-varying buffering delays. In Proceedings of the 2nd Multidisciplinary International Symposium on Positive Systems: Theory and Applications (POSTA '06), Grenoble, France, August 2006. (PDF, 170377 bytes)
M. Gellman and P. Liu. Random neural networks for the adaptive control of packet networks. In ICANN 2006, Artificial Neural Networks, LNCS, volume 4131, pages 313–320, September 2006. (PDF, 397997 bytes)
R. Lent. Design of a manet testbed management system. The Computer Journal, 49(4):171–179, July 2006.
E. Gelenbe, P. Liu, and J. Laine. Genetic algorithms for autonomic route discovery. In Distributed Intelligent Systems: Collective Intelligence and Its Applications, 2006. DIS 2006. IEEE Workshop on, pages 371–376. IEEE, New York, NY, USA, June 2006. (PDF, 120572 bytes)
E. Gelenbe. Travel delay in a large wireless ad hoc network. In 2nd Workshop on Spatial Stochastic Modeling ofWireless Networks, Boston, April 2006. (PDF, 119121 bytes)
E. Gelenbe. Users and services in intelligent networks. In Lecture Notes in Computer Science, volume 3837, pages 30–45, December 2005. Invited paper. Cho, Kenjiro; Jacquet, Philippe (Eds.). (PDF, 197875 bytes)
Laurence A. Hey, Peter Y. K. Cheung, and Michael Gellman. FPGA based router for cognitive packet networks. In Gordon J. Brebner, Samarjit Chakraborty, and Weng-Fai Wong, editors, Proceedings of the International Conference on Field-Programmable Technology, pages 331–332. IEEE, New York, NY, USA, December 2005.
R. Lent and F. Zonoozi. Power control in adhoc cognitive packet networks. In Proceedings of the 2005 Texas Wireless Symposium, October 2005. (PDF, 138899 bytes)
R. Lent and P. Liu. Searching for low latency routes in CPN with reduced packet overhead. In Proceedings of ISCIS 2005, Advances in Computer Science and Engineering Series, Imperial College Press, London, UK, October 2005. (PDF, 253026 bytes)
R. Lent. A testbed validation tool for MANET implementations. In Proceedings of the 2005 IEEE Symposium on Modeling, Analysis, and Simulation of Computer and Telecommunication Systems (MASCOTS), September 2005.
E. Gelenbe and P. Liu. QoS and routing in the cognitive packet network. In Proceedings of the IEEE International Symposium on a World of Wireless, Mobile and Multimedia Networks, pages 517–521, June 2005. (PDF, 145974 bytes)
E. Gelenbe, M. Gellman, and G. Loukas. An autonomic approach to denial of service defence. In Proceedings of the International Symposium on a World of Wireless Mobile and Multimedia Networks (WoWMoM '05), pages 537–541. IEEE, New York, NY, USA, June 2005. (PDF, 880924 bytes)
E. Gelenbe, M. Gellman, and G. Loukas. Defending networks against denial of service attacks. In E.M. Carapezza, editor, Proceedings of the Conference on Optics/Photonics in Security and Defence (SPIE), Unmanned/Unattended Sensors and Sensor Networks, volume 5611, pages 233–243, London, UK, October 2004.
E. Gelenbe, R. Lent, and A. Nunez. Self-aware networks and QoS. Proceedings of the IEEE, 92(9):1478–1489, September 2004. (PDF, 186031 bytes)
E. Gelenbe and R. Lent. Power-aware ad hoc cognitive packet networks. Ad Hoc Networks Journal, 2(3):205–216, July 2004.
M. Gellman and P. Su. Using adaptive routing to achieve quality of service. Performance Evaluation, 57(2):105–119, June 2004. (PDF, 653077 bytes)
E. Gelenbe, M. Gellman, R. Lent, P. Liu, and Pu Su. Autonomous smart routing for network QoS. In Proceedings of the First International Conference on Autonomic Computing, pages 232–239, New York, NY, May 2004. (PDF, 1447593 bytes)
Erol Gelenbe. Sensible decisions based on qos. Computational Management Science, 1(1):1–14, dec 2003. (PDF, 117226 bytes)
E. Gelenbe, R. Lent, and A. Nunez. Smart WWW traffic balancing. In Proceedings of the IEEE Comm. Society Workshop on IP Operations and Management, pages 15–22, October 2003. (PDF, 1913264 bytes)
E. Gelenbe, M. Gellman, and Pu Su. Self-awareness and adaptivity for QoS. In Proceedings of the IEEE International Symposium on Computers and Communications, pages 3–9, June 2003. Invited Paper. (PDF, 343657 bytes)
E. Gelenbe, R. Lent, A. Montuori, and Z. Xu. Towards networks with cognitive packets. In Proceedings of the International Conference on Performance and QoS of Next Generation Networking, pages 3–17, Nagoya, Japan, November 2002. Opening Invited Paper. (PDF, 248048 bytes)
E. Gelenbe, R. Lent, A. Montuori, and Z. Xu. Cognitive packet networks: QoS and performance. In Proceedings of the IEEE MASCOTS Conference, pages 3–12, Ft. Worth, TX, October 2002. Opening Keynote Paper. (PDF, 297917 bytes)
E. Gelenbe and R. Lent. Mobile ad-hoc cognitive packet networks. In Proceedings of the IEEE ASWN Conference, Paris, FR, July 2002. (PDF, 7283956 bytes)
E. Gelenbe, R. Lent, and Z. Xu. Measurement and performance of a cognitive packet network. Journal of Computer Networks, 37(6):691–701, December 2001. (PDF, 256352 bytes)
C. Cramer and E. Gelenbe. Video quality and traffic QoS in learning based sub-sampled and receiver-interpolated video sequences. IEEE Journal on Selected Areas in Communications, 18(2):150–167, February 2000. (PDF, 405077 bytes)
E. Gelenbe, Z. Xu, and E. Seref. Cognitive packet networks. In Proceedings of the 11th International Conference on Tools with Artificial Intelligence, pages 47–54, November 1999. (PDF, 230387 bytes)
E. Gelenbe, P. Kammerman, and T. Lam. Performance considerations in totally mobile wireless. Performance Evaluation, 36-37:387–399, August 1999. (PDF, 668948 bytes)
E. Gelenbe and A. Ghanwani. Approximate analysis of coupled queueing in atm networks. IEEE Communications Letters, 3(2):31–33, February 1999. (PDF, 166737 bytes)
E. Gelenbe, M. Sungur, C. Cramer, and P. Gelenbe. Traffic and video quality with adaptive neural compression. Multimedia Systems, 4(6):357–369, December 1996. (PDF, 507607 bytes)

Neural Networks and Machine Learning (BibTeX)

E. Gelenbe and S. Timotheou. Random Neural Networks with Synchronised Interactions. Neural Computation, 20(9):2308–2324, 2008. (PDF, 196625 bytes)
E. Gelenbe and S. Timotheou. Synchronised Interactions in Spiked Neuronal Networks. to appear in The Computer Journal, Oxford Journals, 2008. (PDF, 176454 bytes)
S. Timotheou. Nonnegative least squares learning for the random neural network. In Proceedings of the 18th International Conference on Artificial Neural Networks, Prague, Czech Republic, pages 195–204, 2008. (PDF, 187029 bytes)
S. Timotheou. A novel weight initialization method for the random neural network. In Fifth International Symposium on Neural Networks (ISNN), Beijing, China, 2008. (PDF, 195042 bytes)
E. Gelenbe, T. Koçak, and Rong Wang. Wafer surface reconstruction from top-down scanning electron microscope images. Microelectronic Engineering, 75(2):216–233, August 2004.
E. Gelenbe and K. Hussain. Learning in the multiple class random neural network. IEEE Transactions on Neural Networks, 13(6):1257–1267, November 2002.
E. Gelenbe, Z.H. Mao, and Y.D. Li. Function approximation by random neural networks with a bounded number of layers. Journal of Differential Equations and Dynamical Systems, 12(1-2):143–170, 2004.
E. Gelenbe, Z.H. Mao, and Y.D. Li. Function approximation with spiked random networks. IEEE Transactitons on Neural Networks, 10(1):3–9, January 1999.
E. Gelenbe and J.M. Fourneau. Random neural networks with multiple classes of signals. Neural Computation, 11(4):953–963, May 1999.
E. Gelenbe and C. Cramer. Oscillatory corthico-thalamic response to somatosensory input. Biosystems, 48(1-3):67–75, November 1998.
E. Gelenbe. Learning in the recurrent random neural network. Neural Computation, 5:154–164, 1993.
E. Gelenbe. Stability of the random neural network model. Neural Computation, 2:239–247, February 1990.
E. Gelenbe. Random neural networks with negative and positive signals and product form solution. Neural Computation, 1(4):502–510, 1989.

Energy-Aware Networks (BibTeX)

Erol Gelenbe, Ricardo Lent, and Markos Douratsos. Choosing a local or remote cloud. In Proceedings of the Second Symposium on Network Cloud Computing and Applications, London, UK, Dec. 2012.
Erol Gelenbe and Ricardo Lent. Trade-offs between energy and quality of service. In The Second IFIP Conference on Sustainable Internet and ICT for Sustainability, Pisa, Italy, Oct. 2012.
Robert Basmadjian, Hermann De Meer, Ricardo Lent, and Giovanni Giuliani. Cloud computing and its interest in saving energy: the use case of a private cloud. Journal of Cloud Computing, 2012.
Ricardo Lent. A model for network server performance and power consumption. Sustainable Computing: Informatics and Systems, (0), 2012.
E. Gelenbe. Energy packet networks: adaptive energy management for the cloud. In Proceedings of the 2nd International Workshop on Cloud Computing Platforms (CloudCP'12), pages 1–5, Bern, Switzerland, 10 April 2012. ACM, New York, NY, USA. (PDF, 230748 bytes)
Erol Gelenbe. Energy packet networks: smart electricity storage to meet surges in demand. In Proceedings of the 5th International ICST Conference on Simulation Tools and Techniques (SIMUTOOLS'12), pages 1–7, Desenzano del Garda, Italy, 19-23 March 2012. ICST, Brussels, Belgium. (PDF, 124172 bytes)
E. Gelenbe and C. Morfopoulou. Power savings in packet networks via optimised routing. Mobile Networks and Applications, 17(1):152–159, February 2012. (PDF, 154235 bytes)
E. Gelenbe and C. Morfopoulou. Gradient optimisation for network power consumption. In First ICST International Conference on Green Communications and Networking (GreenNets 2011), Colmar, France, 5-7 October 2011. (PDF, 522083 bytes)
E. Gelenbe and T. Mahmoodi. Distributed Energy-Aware Routing of Traffic. In Proceedings of the 26th International Symposium on Computer and Information Sciences (ISCIS'11), London, UK, 26-27 September 2011.
T. Mahmoodi. Energy-Aware Routing in the Cognitive Packet Network. Performance Evaluation, 63(4), ApriL 2011. (PDF, 243869 bytes)
E. Gelenbe and C. Morfopoulou. A Framework for Energy Aware Routing in Packet Networks. The Computer Journal, 54(6), June 2011. (PDF, 328776 bytes)
E. Gelenbe and T. Mahmoodi. Energy-Aware Routing in the Cognitive Packet Network. In International Conference on Smart Grids, Green Communications, and IT Energy-aware Technologies(Energy 2011), page Paper No. Energy_2011_1_20_50090, Venice, Italy, 22-27 May 2011. (PDF, 223533 bytes)
R. Lent. A sensor network to profile the electrical power consumption of computer networks. In IEEE GLOBECOM 2010 Workshop on Green Computing and Communications (accepted), Miami, Florida, USA, 6-10 December 2010. (PDF, 400443 bytes)
R. Lent. Simulating the power consumption of computer networks. In Proceedings of the 15th IEEE International Workshop on Computer Aided Modeling, Analysis and Design of Communication Links and Networks, 2010. (PDF, 544660 bytes)
E. Gelenbe and C. Morfopoulou. Routing and G-Networks to Optimise Energy and Quality of Service in Packet Networks. In Proceedings of the 1st International ICST conference on E-Energy, Athens, Greece, 14-15 October 2010. (PDF, 186642 bytes)
A. Berl, E. Gelenbe, M. di Girolamo, G. Giuliani, H. de Meer, M.-Q. Dang, and K. Pentikousis. Energy-Efficient Cloud Computing. The Computer Journal, 53(7), September 2010, doi:10.1093/comjnl/bxp080. (PDF, 333143 bytes)
E. Gelenbe and S. Silvestri. Reducing Power Consumption in Wired Networks. In Proceedings of the 24th International Symposium on Computer and Information Sciences (ISCIS'09), North Cyprus, 14-16 September 2009. (to appear in IEEE Digital Library). (PDF, 205128 bytes)

Modeling Gene Regulatory Networks (BibTeX)

H. Kim and E. Gelenbe. Stochastic gene expression modeling with hill function for switch-like gene responses. In Proceedings of International Conference on Bioinformatics Biomedicine, pages 302–307, 2010.
H. Kim and E. Gelenbe. Anomaly detection in gene expression via stochastic models of gene regulatory networks. BMC Genomics, 10(Suppl):S26, 2009.
E. Gelenbe. Network of interacting synthetic molecules in steady state. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Science, 464(2096):2219, 2008.
E. Gelenbe. Steady-state solution of probabilistic gene regulatory networks. Physical Review E, 76(3):31903, 2007.

The following is a web site that describes protein-to-protein interaction network alignment methods based on the G-Network and the Random Neural Network:

http://www.sbg.bio.ic.ac.uk/~winarns

The web site provides computed examples of the global alignment of PPINs from different species: human to yeast, fly, worm, and mouse, and also fly to worm and mouse to rat.

Search in Random Environments (BibTeX)

E. Gelenbe and O. H. Abdelrahman. Search in random media with lévy flights. In R. Metzler, G. Oshanin, and S. Redner, editors, First-Passage Phenomena and Their Applications. World Scientific, 2013. (PDF, 691040 bytes)
O. H. Abdelrahman and E. Gelenbe. Time and energy in team-based search. Phys. Rev. E, 87(3):032125, Mar 2013. (PDF, 367682 bytes)
O. H. Abdelrahman and E. Gelenbe. Packet delay and energy consumption in non-homogeneous networks. The Computer Journal: Special Issue on Security and Performance of Networks and Clouds, 55(8):950–964, 2012. (PDF, 549092 bytes)
O. H. Abdelrahman and E. Gelenbe. Search in non-homogenous random environments. SIGMETRICS Performance Evaluation Review, 39(3):37–39, Dec 2011. (PDF, 173740 bytes)
O. H. Abdelrahman and E. Gelenbe. Packets travelling in non-homogeneous networks. In 14th ACM International Conference on Modeling, Analysis and Simulation of Wireless and Mobile Systems (MSWiM'11), pages 361–368, Miami, FL, USA, November 2011. (PDF, 411948 bytes)
E. Gelenbe. Search in unknown random environments. Phys. Rev. E, 82(6):061112, December 2010. (PDF, 395634 bytes)

PhD Dissertations (BibTeX)

Gokce Gorbil. Opportunistic Communications for Emergency Support. PhD thesis, Imperial College London, 2013. (PDF, 4676356 bytes)
O. H. Abdelrahman. Performance Modelling and Optimisation of Multi-hop Networks. PhD thesis, Imperial College London, 2012. (PDF, 2312649 bytes)
Laurence Hey. Simplified Adaptive Routing and its Impact on Quality of Service and Quality of Information. PhD thesis, Imperial College London, 2009. (PDF, 10523425 bytes)
Georgia Sakellari. Maintaining Quality of Service and Reliability in Self-Aware Networks. PhD thesis, Imperial College London, 2009. (PDF, 3629289 bytes)
Michael Gellman. QoS Routing for Real-time Traffic. PhD thesis, Imperial College London, 2007. (PDF, 5590781 bytes)
George Loukas. Defence Against Denial of Service in Self-Aware Networks. PhD thesis, Imperial College, University of London, 2006. (PDF, 3325447 bytes)
Ricardo Lent. On The Design and Performance of Cognitive Packets over Wired Networks and Mobile Ad Hoc Networks. PhD thesis, University of Central Florida, 2003. (PDF, 1436141 bytes)